Selected Biosequence Sources on the Internet
- http://golgi.harvard.edu/sequences.html
WWW Virtual Library - Biosciences: Biosequences Section
- http://www.ncbi.nlm.nih.gov/
Home page for National Center for Biotechnology Information. Home to a wide variety of relevant databases, including some listed below.
- http://www3.ncbi.nlm.nih.gov/Entrez/index.html
Entrez: Nucleotides, Proteins, 3-D Structures, Genomes
From NCBI. Searchable by author, keyword, gene and protein codes, source organism, etc. Display has links between records. Searches multiple databases, including NCBI's GenBank.
- http://www.ncbi.nlm.nih.gov/BLAST/
BLAST
BLAST stands for Basic Local Alignment Search Tool.
Also from NCBI, links to Entrez. Searches a number of different databases for amino acid or nucleotide sequences.
- http://www.ncbi.nlm.nih.gov/Omim/
OMIM Online Mendelian Inheritance in Man. Database of human genes linked to their products and disorders or syndromes linked to them.
Extensive links to Entrez.
- http://www.ncbi.nlm.nih.gov/irx/cgi-bin/swiss
SWISS-PROT: Protein sequences
Searchable by sequence, organism, gene, etc.
(also: http://expasy.hcuge.ch/sprot/sprot-top.html Searchable by authors)
- http://www.ncbi.nlm.nih.gov/irx/cgi-bin/pir
PIR: Protein sequences
Includes journal references
- http://expasy.hcuge.ch/
ExPASy : Variety of databases, tools, etc.
- http://www.pdb.bnl.gov/pdb-bin/pdbmain
PDB: Protein Data Bank from Brookhaven National Laboratory
Searchable by author, journal, organism, keyword. Gives sequence, document information, often lengthy remarks.
- http://www.bis.med.jhmi.edu/Dan/proteins/owl.html
OWL: Non-redundant Protein Database from Johns Hopkins
Combines SWISS-PROT, PIR, GenBank, NRL 3-D with links back to original sources. Keyword searchable.
- http://www.embl-heidelberg.de/srs5/
SRS: Sequence Retrieval System:
This server, at the European Molecular Biology Laboratory, Heidelberg, allows searching of multiple databases (over 30). Descriptions of the individual databases give less detail than the parent servers.
Author: Chuck Huber (huber@library.ucsb.edu). Last modified: November 18, 1997