Selected Biosequence Sources on the Internet

  1. http://golgi.harvard.edu/sequences.html

    WWW Virtual Library - Biosciences: Biosequences Section

  2. http://www.ncbi.nlm.nih.gov/

    Home page for National Center for Biotechnology Information. Home to a wide variety of relevant databases, including some listed below.

  3. http://www3.ncbi.nlm.nih.gov/Entrez/index.html

    Entrez: Nucleotides, Proteins, 3-D Structures, Genomes
    From NCBI. Searchable by author, keyword, gene and protein codes, source organism, etc. Display has links between records. Searches multiple databases, including NCBI's GenBank.

  4. http://www.ncbi.nlm.nih.gov/BLAST/

    BLAST
    BLAST stands for Basic Local Alignment Search Tool.
    Also from NCBI, links to Entrez. Searches a number of different databases for amino acid or nucleotide sequences.

  5. http://www.ncbi.nlm.nih.gov/Omim/

    OMIM Online Mendelian Inheritance in Man. Database of human genes linked to their products and disorders or syndromes linked to them.
    Extensive links to Entrez.

  6. http://www.ncbi.nlm.nih.gov/irx/cgi-bin/swiss

    SWISS-PROT: Protein sequences
    Searchable by sequence, organism, gene, etc.
    (also: http://expasy.hcuge.ch/sprot/sprot-top.html Searchable by authors)

  7. http://www.ncbi.nlm.nih.gov/irx/cgi-bin/pir

    PIR: Protein sequences
    Includes journal references

  8. http://expasy.hcuge.ch/

    ExPASy : Variety of databases, tools, etc.

  9. http://www.pdb.bnl.gov/pdb-bin/pdbmain

    PDB: Protein Data Bank from Brookhaven National Laboratory
    Searchable by author, journal, organism, keyword. Gives sequence, document information, often lengthy remarks.

  10. http://www.bis.med.jhmi.edu/Dan/proteins/owl.html

    OWL: Non-redundant Protein Database from Johns Hopkins
    Combines SWISS-PROT, PIR, GenBank, NRL 3-D with links back to original sources. Keyword searchable.

  11. http://www.embl-heidelberg.de/srs5/

    SRS: Sequence Retrieval System:
    This server, at the European Molecular Biology Laboratory, Heidelberg, allows searching of multiple databases (over 30). Descriptions of the individual databases give less detail than the parent servers.


Author: Chuck Huber (huber@library.ucsb.edu). Last modified: November 18, 1997

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